Text Mining Symposium 2009

Fraunhofer Institute for Algorithms and Scientific Computing SCAI

From Algorithmic Foundations to Real Application

    From Algorithmic Foundations to Real Application

5th October

Registration open from 14:00 – 19:00

Tutorials

Time Subject
14:30 – 15:30 ChemoCR
15:45 – 16:45 ProMiner/SCAIView
17:00 – 18:00 Luxid
19:00 – 19:30 Walk along the Rhine to the restaurant »Zur Lese«
19:30 – END Dinner

6th October

Symposium with presentations from 8:30 – 17:30

Presentations

Time Name Subject
9:00 – 9:15 Opening Address
Martin Hofmann-Apitius; Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing SCAI
 
9:15 – 10:00 Luca Toldo
Knowledge Management, R&D, MerckSerono, Merck KGaA, Darmstadt
Text Mining at Merck KGaA: Use Cases and lessons learned
10:00 – 10:30 Mathias Göschl
LIFE Biosystems GmbH, Heidelberg
Knowledge-driven Development of Therapeutic Models: Critical Aspects of implementing Text Mining in a Professional Research Environment
10:30 – 11:00 DISCUSSION AND COFFEE BREAK 
11:00 – 11:30 Juliane Fluck
Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing SCAI
Challenges for PDF Annotation
11:30 – 12:00 Karen Dowell
Mouse Genome Informatics at The Jackson Laboratory Bar Harbor, USA
ProMiner at MGI: Implementing Dictionary-Based Named Entity Recognition Solutions for Mining Biomedical Literature
12:00 – 12:40 Olivier Feller/Daniel Mayer
TEMIS Paris, France
Pharmacovigilance the other discovery process in Pharma
12:40 – 14:00 LUNCH  
14:00 – 14:40 Martin Brändle/
Valentina Eigner Pitto

ETH Zürich/InfoChem GmbH Munich
Digitalization and Chemical Entity Recognition of Chemisches Zentralblatt: Unrivaled Historical Information Meets Modern Technology
14:40 – 15:20 John Tait
Information Retrieval Faculty (IRF), Vienna, Austria
Text Mining and Indexing: Assessing the Results of Deeper Indexing for Patent Search
15:20 – 15:50 COFFEE BREAK  
15:50 – 16:30

Marc Zimmermann
Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing SCAI

Large Scale Chemical Patent Processing
16:30 – 17:00 Thomas Herbst
B-S-S Business Software Solutions GmbH, Eisenach
Text Mining in Combination with Enterprise Search Solutions
17:00 – 17:30 Martin Hofmann-Apitius
Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing SCAI
Conclusions

Organizational Contact

Natascha Silva-Wipperfürth
scapos AG
Schloss Birlinghoven
53754 Sankt Augustin
Phone +49 (0) 2241-14 2821
Fax +49 (0) 2241-14 2817

Partner and Sponsors

Hotel Information

Bonn offers a variety of hotels for any taste. We recommend you to choose hotels in the city center of Bonn. The hotels should be located in walking distance of the Hotel Königshof.
A limited number of guest rooms have been reserved exclusively for attendees of the symposium at the following hotels:

Please ask for the special FRAUNHOFER RATE and be sure to place the keyword “Text Mining Symposium 2009” in your booking.

Photo Gallery

Experts from Life Science industry, scientists and students listened to new text mining solutions.
Innovative computational applications have been presented at the 7th Text Mining Symposium.
Luca Toldo (Knowledge Management, R&D, MerckSerono, Merck KGaA, Darmstadt) Text Mining at Merck KGaA: Use Cases and lessons learned

Mathias Göschl (LIFE Biosystems GmbH, Heidelberg) Knowledge-driven Development of Therapeutic Models: Critical Aspects of implementing Text Mining in a Professional Research Environment


Juliane Fluck (Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing SCAI) Challenges for PDF Annotation
Karen Dowell (Mouse Genome Informatics at The Jackson Laboratory Bar Harbor, USA) ProMiner at MGI: Implementing Dictionary-Based Named Entity Recognition Solutions for Mining Biomedical Literature
Daniel Mayer (TEMIS Paris, France) Deriving Enterprise Value from Text Mining: A specific use case

Olivier Feller (TEMIS Paris, France) Deriving Enterprise Value from Text Mining: A specific use case




Martin Brändle (ETH Zürich) Digitalization and Chemical Entity Recognition of Chemisches Zentralblatt: Unrivaled Historical Information Meets Modern Technology
Martin Brändle (ETH Zürich) Digitalization and Chemical Entity Recognition of Chemisches Zentralblatt: Unrivaled Historical Information Meets Modern Technology
Valentina Eigner Pitto (InfoChem GmbH Munich) Digitalization and Chemical Entity Recognition of Chemisches Zentralblatt: Unrivaled Historical Information Meets Modern Technology

John Tait (Information Retrieval Faculty (IRF), Vienna) Text Mining and Indexing: Assessing the Results of Deeper Indexing for Patent Search

Marc Zimmermann (Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing SCAI) Large Scale Chemical Patent Processing
Marc Zimmermann (Department of Bioinformatics, Fraunhofer Institute for Algorithms and Scientific Computing SCAI) Large Scale Chemical Patent Processing
Thomas Herbst (B-S-S Business Software Solutions GmbH, Eisenach) Text Mining in Combination with Enterprise Search Solutions
Thomas Herbst (B-S-S Business Software Solutions GmbH, Eisenach) Text Mining in Combination with Enterprise Search Solutions

Fotos von Bianca Backert, Mediengestalterin