Fraunhofer Institute for Algorithms and Scientific Computing SCAI| Year | Title/Author | Document Type |
|---|---|---|
| 2020 | Algebraic multigrid for the finite pointset method
Metsch, B.; Nick, F.; Kuhnert, J. | Journal Article |
| 2020 | Algebraic Wavefront Parallelization for ILU(0) Smoothing in Reservoir Simulation
Gries, Sebastian | Conference Paper |
| 2020 | Analysis and Prediction of Deforming 3D Shapes using Oriented Bounding Boxes and LSTM Autoencoders
Hahner, Sara; Iza-Teran, Rodrigo; Garcke, Jochen | Conference Paper |
| 2020 | Automatic analysis of crash simulations with dimensionality reduction algorithms such as PCA and t-SNE
Kracker, David; Garcke, Jochen; Schumacher, Axel; Schwanitz, P. | Conference Paper |
| 2020 | Challenges of Integrative Disease Modeling in Alzheimer's Disease
Golriz Khatami, Sepehr; Robinson, C.; Birkenbihl, C.; Domingo-Fernandez, D.; Hoyt, C.T.; Hofmann-Apitius, M. | Journal Article |
| 2020 | Clustering of Alzheimer's and Parkinson's disease based on genetic burden of shared molecular mechanisms
Emon, Mohammad Asif; Heinson, Ashley; Wu, Ping; Domingo-Fernández, Daniel; Sood, Meemansa; Vrooman, Henri; Corvol, Christophe; Scordis, Phil; Hofmann-Apitius, Martin; Fröhlich, Holger | Journal Article |
| 2020 | Combining Machine Learning and Simulation to a Hybrid Modelling Approach: Current and Future Directions
Rüden, Laura von; Mayer, Sebastian; Sifa, Rafet; Bauckhage, Christian; Garcke, Jochen | Conference Paper |
| 2020 | A Compact Spectral Descriptor for Shape Deformations
Sible, Skylar; Iza-Teran, Rodrigo; Garcke, Jochen; Aulig, Nikola; Wollstadt, Patricia | Conference Paper |
| 2020 | Comprehensive analysis of tumor necrosis factor receptor TNFRSF9 (4-1BB) DNA methylation with regard to molecular and clinicopathological features, immune infiltrates, and response prediction to immunotherapy in melanoma
Fröhlich, A.; Loick, S.; Bawden, E.G.; Fietz, S.; Dietrich, J.; Diekmann, E.; Saavedra, G.; Fröhlich, H.; Niebel, D.; Sirokay, J.; Zarbl, R.; Gielen, G.H.; Kristiansen, G.; Bootz, F.; Landsberg, J.; Dietrich, D. | Journal Article |
| 2020 | A Computational Approach for Mapping Heme Biology in the Context of Hemolytic Disorders
Humayun, Farah; Domingo-Fernández, Daniel; Abisheck Paul George, Ajay; Hopp, Marie-Thérèse; Syllwasschy, Benjamin; Detzel, Milena; Tapley Hoyt, Charles; Hofmann-Apitius, Martin; Imhof, Diana | Journal Article |
| 2020 | Corrigendum: The Impact of Pathway Database Choice on Statistical Enrichment Analysis and Predictive Modeling: (Frontiers in Genetics, (2019), 10, 10.3389/fgene.2019.01203)
Mubeen, S.; Tapley Hoyt, C.; Gemünd, A.; Hofmann-Apitius, M.; Fröhlich, H.; Domingo-Fernandez, D. | Journal Article |
| 2020 | COVID-19 Knowledge Graph: A computable, multi-modal, cause-and-effect knowledge model of COVID-19 pathophysiology
Domingo-Fernández, Daniel; Baksi, Shounak; Schultz, Bruce; Gadiya, Yojana; Kark, Reagon; Raschka, Tamara; Ebeling, Christian; Hofmann-Apitius, Martin; Kodamullil, Alpha Tom | Journal Article |
| 2020 | The COVID-19 Ontology
Sargsyan, Astghik; Kodamullil, Alpha Tom; Baksi, Shounak; Darms, Johannes; Madan, Sumit; Gebel, Stephan; Keminer, Oliver; Jose, Geena Mariya; Balabin, Helena; DeLong, Lauren Nicole; Kohler, Manfred; Jacobs, Marc; Hofmann-Apitius, Martin | Journal Article |
| 2020 | Data science in neurodegenerative disease: Its capabilities, limitations, and perspectives
Golriz Khatami, Sepehr; Mubeen, S.; Hofmann-Apitius, Martin | Journal Article |
| 2020 | Determination of relevant mechanical properties for the production process of polyethylene by using mesoscale molecular simulation techniques
Grommes, D.; Reith, D. | Journal Article |
| 2020 | Differences in cohort study data affect external validation of artificial intelligence models for predictive diagnostics of dementia - lessons for translation into clinical practice
Birkenbihl, Colin; Emon, Mohammad Asif; Vrooman, Henri; Westwood, Sarah; Lovestone, Simon; Hofmann-Apitius, Martin; Fröhlich, Holger | Journal Article |
| 2020 | Drug repositioning of antiretroviral ritonavir for combinatorial therapy in glioblastoma
Rauschenbach, Laurèl; Wieland, Anja; Reinartz, Roman; Kebir, Sied; Till, Andreas; Darkwah Oppong, Marvin; Dobersalske, Celia; Ullrich, Vivien; Ahmad, Ashar; Jabbarli, Ramazan; Pierscianek, Daniela; Fröhlich, Holger; Simon, Matthias; Brüstle, Oliver; Sure, Ulrich; Glas, Martin; Scheffler, Björn | Journal Article |
| 2020 | Drug2ways: Reasoning over causal paths in biological networks for drug discovery
Rivas-Barragan, Daniel; Mubeen, Sarah; Guim Bernat, Francesc; Hofmann-Apitius, Martin; Domingo-Fernández, Daniel | Journal Article |
| 2020 | Entropy Numbers of Finite Dimensional Mixed-Norm Balls and Function Space Embeddings with Small Mixed Smoothness
Mayer, S.; Ullrich, T. | Journal Article |
| 2020 | Evaluating the Alzheimer's disease data landscape
Birkenbihl, Colin; Salimi, Yasamin; Domingo-Fernandez, Daniel; Lovestone, Simon; Fröhlich, Holger; Hofmann-Apitius, Martin | Journal Article |
| 2020 | Explain it to me - facing remote sensing challenges in the bio- and geosciences with explainable machine learning
Roscher, R.; Bohn, B.; Duarte, M.F.; Garcke, J. | Conference Paper |
| 2020 | Explainable Machine Learning for Scientific Insights and Discoveries
Roscher, R.; Bohn, B.; Duarte, M.F.; Garcke, J. | Journal Article |
| 2020 | The future of German MeSH: a new semi-automatic translation process and new services for search and annotation
Langnickel, Lisa; Baum, Roman; Wollnik-Korn, Gabriele; Fischer-Wagener, Brigitte; Madan, Sumit; Fluck, Juliane | Journal Article |
| 2020 | Generalization of algebraic multiscale to algebraic multigrid
Ehrmann, Silvia; Gries, Sebastian; Schweitzer, Marc Alexander | Journal Article |
| 2020 | GuiltyTargets: Prioritization of Novel Therapeutic Targets with Deep Network Representation Learning
Muslu, Özlem; Hoyt, Charles Tapley; Lacerda, Mauricio Pio de; Hofmann-Apitius, Martin; Fröhlich, Holger | Journal Article |
| 2020 | Identifying multimodal signatures underlying the somatic comorbidity of psychosis: The COMMITMENT roadmap: Guest Editorial
Schwarz, Emanuel; Alnæs, Dag; Andreassen, Ole A.; Cao, Han; Chen, Junfang; Degenhardt, Franziska; Doncevic, Daria; Dwyer, Dominic; Eils, Roland; Erdmann, Jeanette; Herrmann, Carl; Hofmann-Apitius, Martin; Kaufmann, Tobias; Koutsouleris, Nikolaos; Kodamullil, Alpha Tom; Khuntia, Adyasha; Mucha, Sören; Nöthen, Markus M.; Paul, Riya; Pedersen, Mads L.; Quintero, Andres; Schunkert, Heribert; Sharma, Ashwini; Tost, Heike; Westlye, Lars T.; Zhang, Youcheng; Meyer-Lindenberg, Andreas | Journal Article |
| 2020 | Informed Machine Learning - A Taxonomy and Survey of Integrating Knowledge into Learning Systems
Rüden, Laura von; Mayer, Sebastian; Beckh, Katharina; Georgiev, Bogdan; Giesselbach, Sven; Heese, Raoul; Kirsch, Birgit; Pfrommer, Julius; Pick, Annika; Ramamurthy, Rajkumar; Walczak, Michal; Garcke, Jochen; Bauckhage, Christian; Schuecker, Jannis | Report |
| 2020 | A Landscape Analysis of Standardisation in the Field of Artificial Intelligence
Ziegler, Wolfgang | Journal Article |
| 2020 | Lattice Boltzmann simulations on irregular grids: Introduction of the NATriuM library
Krämer, Andreas; Wilde, Dominik; Küllmer, Knut; Reith, Dirk; Foysi, Holger; Joppich, Wolfgang | Journal Article |
| 2020 | Mathematical Modeling of Alkaline Methanol Oxidation for Design of Efficient Fuel Cells
Clees, Tanja; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Haisch, Theresa | Conference Paper |
| 2020 | Multicenter Alzheimer's and Parkinson's disease immune biomarker verification study
Brosseron, Frederic; Kolbe, Carl-Christian; Santarelli, Francesco; Carvalho, Stephanie; Antonell, Anna; Castro-Gomez, Sergio; Tacik, Pawel; Namasivayam, Aishwarya Alex; Mangone, Graziella; Schneider, Reinhard; Latz, Eicke; Wüllner, Ullrich; Svenningsson, Per; Sánchez-Valle, Raquel; Molinuevo, José Luis; Corvol, Jean-Christophe; Heneka, Michael T.; Hofmann-Apitius, Martin; Springstubbe, Stephan; Fröhlich, Holger; et al. | Journal Article |
| 2020 | MultiPaths. A python framework for analyzing multi-layer biological networks using diffusion algorithms
Marín-Llaó, Josep; Mubeen, Sarah; Perera-Lluna, Alexandre; Hofmann-Apitius, Martin; Picart-Armada, Sergio; Domingo-Fernández, Daniel | Journal Article |
| 2020 | Neural Network Compression via Learnable Wavelet Transforms
Wolter, Moritz; Lin, Shaohui; Yao, Angela | Conference Paper |
| 2020 | A note on £2p-completeness of a robust binary linear program with binary uncertainty set
Claus, M.; Simmoteit, M. | Journal Article |
| 2020 | Optimal multiparametric set-up modelled for best survival outcomes in palliative treatment of liver malignancies: Unsupervised machine learning and 3 PM recommendations
Goldstein, Elisha; Yeghiazaryan, Kristina; Ahmad, Ashar; Giordano, Frank A.; Fröhlich, Holger; Golubnitschaja, Olga | Journal Article |
| 2020 | The origin of the hysteresis in cyclic voltammetric response of alkaline methanol electrooxidation
Haisch, Theresa; Kubannek, Fabian; Nikitina, Lialia; Nikitin, Igor; Pott, Sabine; Clees, Tanja; Krewer, Ulrike | Journal Article |
| 2020 | Parameter Identification and Model Reduction in the Design of Alkaline Methanol Fuel Cells
Clees, Tanja; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Pott, Sabine; Krewer, Ulrike; Haisch, Theresa; Kubannek, Fabian | Journal Article |
| 2020 | PathME: Pathway based multi-modal sparse autoencoders for clustering of patient-level multi-omics data
Lemsara, Amina; Ouadfel, Salima; Fröhlich, Holger | Journal Article |
| 2020 | Proposal of an Architecture for Terminology Management in a Research Project
Mora, Sara; Madan, Sumit; Gebel, Stephan; Giacomini, Mauro | Conference Paper |
| 2020 | PS4DR: A multimodal workflow for identification and prioritization of drugs based on pathway signatures
Emon, Mohammad Asif; Domingo-Fernandez, Daniel; Tapley Hoyt, Charles; Hofmann-Apitius, Martin | Journal Article |
| 2020 | Pure Functions in C: A Small Keyword for Automatic Parallelization
Süß, T.; Nagel, L.; Vef, M.-A.; Brinkmann, A.; Feld, D.; Soddemann, T. | Journal Article |
| 2020 | Quantum Machine Learning. Eine Analyse zu Kompetenz, Forschung und Anwendung
Bauckhage, Christian; Brito, Eduardo; Daase, Inga; Franken, Lukas; Georgiev, Bogdan; Hecker, Dirk; Paschke, Adrian; Piatkowski, Nico; Soddemann, Thomas; Trabold, Daniel | Study |
| 2020 | Realistic simulation of virtual multi-scale, multi-modal patient trajectories using Bayesian networks and sparse auto-encoders
Sood, M.; Sahay, A.; Karki, R.; Emon, M.A.; Vrooman, H.; Hofmann-Apitius, M.; Fröhlich, H. | Journal Article |
| 2020 | The recovery of ridge functions on the hypercube suffers from the curse of dimensionality
Doerr, B.; Mayer, S. | Journal Article |
| 2020 | SEAweb: The small RNA Expression Atlas web application
Rahman, Raza-Ur; Liebhoff, Anna-Maria; Bansal, Vikas; Fiosins, Maksims; Rajput, Ashish; Sattar, Abdul; Magruder, Daniel S.; Madan, Sumit; Sun, Ting; Gautam, Abhivyakti; Heins, Sven; Liwinski, Timur; Bethune, Jörn; Trenkwalder, Claudia; Fluck, Juliane; Mollenhauer, Brit; Bonn, Stefan | Journal Article |
| 2020 | SEEDS: Data driven inference of structural model errors and unknown inputs for dynamic systems biology
Newmiwaka, Tobias; Engelhardt, Benjamin; Wendland, Philipp; Kahl, Dominik; Fröhlich, Holger; Kschischo, Maik | Journal Article |
| 2020 | Semi-Lagrangian lattice Boltzmann method for compressible flows
Wilde, D.; Krämer, A.; Reith, D.; Foysi, H. | Journal Article |
| 2020 | Sequence Prediction Using Spectral RNNs
Wolter, Moritz; Gall, Jürgen; Yao, Angela | Conference Paper |
| 2020 | Simplex stochastic collocation for piecewise smooth functions with kinks
Fuchs, Barbara; Garcke, Jochen | Journal Article |
| 2020 | Solving sorting of rolling stock problems utilizing pseudochain structures in graphs
Dörpinghaus, J.; Schrader, R. | Conference Paper |
| 2020 | Systems Toxicology Approach for Testing Chemical Cardiotoxicity in Larval Zebrafish
Li, Roman; Zupanic, Anze; Talikka, Marja; Belcastro, Vincenzo; Madan, Sumit; Dörpinghaus, Jens; Berg, Colette vom; Szostak, Justyna; Martin, Florian; Peitsch, Manuel C.; Hoeng, Julia | Journal Article |
| 2020 | Topological Reduction of Stationary Network Problems: Example of Gas Transport
Baldin, Anton; Clees, Tanja; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia | Journal Article |
| 2020 | Variational Autoencoder Modular Bayesian Networks for Simulation of Heterogeneous Clinical Study Data
Gootjes-Dreesbach, Luise; Sood, Meemansa; Sahay, Akrishta; Hofmann-Apitius, Martin; Fröhlich, Holger | Journal Article |
| 2020 | Voice perturbations under the stress overload in young individuals: Phenotyping and suboptimal health as predictors for cascading pathologies
Kunin, Anatolij; Sargheini, Nafiseh; Birkenbihl, Colin; Moiseeva, Natalia; Fröhlich, Holger; Golubnitschaja, Olga | Journal Article |
| 2020 | What identifies a whale by its fluke? On the benefit of interpretable machine learning for whale identification
Kierdorf, J.; Garcke, J.; Behley, J.; Cheeseman, T.; Roscher, R. | Conference Paper |
This publication list has been generated from the publication database Fraunhofer-Publica.