Scientific Publications 2016

Jahr Year	Titel/Autor:in Title/Author	Publikationstyp Publication Type
2016	Overview of the interactive task in BioCreative V Wang, Q.; Abdul, S.S.; Almeida, L.; Ananiadou, S.; Balderas-Martínez, Y.I.; Batista-Navarro, R.; Campos, D.; Chilton, L.; Chou, H.-J.; Contreras, G.; Cooper, L.; Dai, H.-J.; Ferrell, B.; Fluck, J.; Gama-Castro, S.; George, N.; Gkoutos, G.; Irin, A.K.; Jensen, L.J.; Jimenez, S.; Jue, T.R.; Keseler, I.; Madan, S.; Matos, S.; McQuilton, P.; Milacic, M.; Mort, M.; Natarajan, J.; Pafilis, E.; Pereira, E.; Rao, S.; Rinaldi, F.; Rothfels, K.; Salgado, D.; Silva, R.M.; Singh, O.; Stefancsik, R.; Su, C.-H.; Subramani, S.; Tadepally, H.D.; Tsaprouni, L.; Vasilevsky, N.; Wang, X.; Chatr-Aryamontri, A.; Laulederkind, S.J.F.; Matis-Mitchell, S.; McEntyre, J.; Orchard, S.; Pundir, S.; Rodriguez-Esteban, R.; Auken, K. van; Lu, Z.; Schaeffer, M.; Wu, C.H.; Hirschman, L.; Arighi, C.N.	Zeitschriftenaufsatz Journal Article
2016	Advancing a gateway infrastructure for wind turbine data analysis Aguilera, Alvaro; Grunzke, Richard; Habich, Dirk; Luong, Johannes; Schollbach, Dirk; Markwardt, Ulf; Garcke, Jochen	Zeitschriftenaufsatz Journal Article
2016	Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease Allen, G.I.; Amoroso, N.; Anghel, C.; Balagurusamy, V.; Bare, C.J.; Beaton, D.; Bellotti, R.; Bennett, D.A.; Boehme, K.L.; Boutros, P.C.; Caberlotto, L.; Caloian, C.; Campbell, F.; Chaibub Neto, E.; Chang, Y.-C.; Chen, B.; Chen, C.-Y.; Chien, T.-Y.; Clark, T.; Das, S.; Davatzikos, C.; Deng, J.; Dillenberger, D.; Dobson, R.J.B.; Dong, Q.; Doshi, J.; Duma, D.; Errico, R.; Erus, G.; Everett, E.; Fardo, D.W.; Friend, S.H.; Fröhlich, H.; Gan, J.; St George-Hyslop, P.; Ghosh, S.S.; Glaab, E.; Green, R.C.; Guan, Y.; Hong, M.-Y.; Huang, C.; Hwang, J.; Ibrahim, J.; Inglese, P.; Iyappan, A.; Jiang, Q.; Katsumata, Y.; Kauwe, J.S.K.; Klein, A.; Kong, D.; Krause, R.; Lalonde, E.; Lauria, M.; Lee, E.; Lin, X.; Liu, Z.; Livingstone, J.; Logsdon, B.A.; Lovestone, S.; Ma, T.-W.; Malhotra, A.; Mangravite, L.M.; Maxwell, T.J.; Merrill, E.; Nagorski, J.; Namasivayam, A.; Narayan, M.; Naz, M.; Newhouse, S.J.; Norman, T.C.; Nurtdinov, R.N.; Oyang, Y.-J.; Pawitan, Y.; Peng, S.; Peters, M.A.; Piccolo, S.R.; Praveen, P.; Priami, C.; Sabelnykova, V.Y.; Senger, P.; Shen, X.; Simmons, A.; Sotiras, A.; Stolovitzky, G.; Tangaro, S.; Tateo, A.; Tung, Y.-A.; Tustison, N.J.; Varol, E.; Vradenburg, G.; Weiner, M.W.; Xiao, G.; Xie, L.; Xie, Y.; Xu, J.; Yang, H.; Zhan, X.; Zhou, Y.; Zhu, F.; Zhu, H.; Zhu, S.	Zeitschriftenaufsatz Journal Article
2016	Shared genetic risk factors of intracranial, abdominal, and thoracic aneurysms Hof, F.N.G. van't; Ruigrok, Y.M.; Lee, C.H.; Ripke, S.; Anderson, G.; Andrade, M. de; Baas, A.F.; Blankensteijn, J.D.; Böttinger, E.P.; Bown, M.J.; Broderick, J.; Bijlenga, P.; Carrell, D.S.; Crawford, D.C.; Crosslin, D.R.; Ebeling, C.; Eriksson, J.G.; Fornage, M.; Foroud, T.; Fraunberg, M. von und zu; Friedrich, C.M.; Gaál, E.I.; Gottesman, O.; Guo, D.C.; Harrison, S.C.; Hernesniemi, J.; Hofman, A.; Inoue, I.; Jääskeläinen, J.E.; Jones, G.T.; Kiemeney, L.A.L.M.; Kivisaari, R.; Ko, N.; Koskinen, S.; Kubo, M.; Kullo, I.J.; Kuivaniemi, H.; Kurki, M.I.; Laakso, A.; Lai, D.; Leal, S.M.; Lehto, H.; LeMaire, S.A.; Low, S.K.; Malinowski, J.; McCarty, C.A.; Milewicz, D.M.; Mosley, T.H.; Nakamura, Y.; Nakaoka, H.; Niemelä, M.; Pacheco, J.; Peissig, P.L.; Pera, J.; Rasmussen-Torvik, L.; Ritchie, M.D.; Rivadeneira, F.; Rij, A.M. van; Santos-Cortez, R.L.P.; Saratzis, A.; Slowik, A.; Takahashi, A.; Tromp, G.; Uitterlinden, A.G.; Verma, S.S.; Vermeulen, S.H.; Wang, G.T.; Han, B.; Rinkel, G.J.E.; Bakker, P.I.W. de	Zeitschriftenaufsatz Journal Article
2016	The BEL information extraction workflow (BELIEF): Evaluation in the BioCreative V BEL and IAT track Madan, Sumit; Hodapp, Sven; Senger, Philipp; Ansari, Sam; Szostak, Justyna; Hoeng, Julia; Peitsch, Manuel; Fluck, Juliane	Zeitschriftenaufsatz Journal Article
2016	Training and evaluation corpora for the extraction of causal relationships encoded in biological expression language (BEL) Fluck, Juliane; Madan, Sumit; Ansari, Sam; Kodamullil, Alpha T.; Karki, Reagon; Rastegar-Mojarad, Majid; Catelett, Natalie L.; Hayes, William; Szostak, Justyna; Hoeng, Julia; Peitsch, Manuel C.	Zeitschriftenaufsatz Journal Article
2016	Cloud standards Ziegler, Wolfgang; Edmonds, Andy; Metsch, Thijs; Richardson, Alexis; Harsh, Piyush; Kershaw, Philip; Sill, Alan; Carlson, Mark A.; Heneveld, Alex; Atonescu, Alexandru-Florian; Bohnert, Thomas Michael	Aufsatz in Buch Book Article
2016	A multilevel approach to the evolutionary generation of polycrystalline structures Barker, James; Bollerhey, Gregor; Hamaekers, Jan	Zeitschriftenaufsatz Journal Article
2016	A co-simulation approach to model the thermal behavior of automotive vehicles during dynamic driving cycles Brodbeck, Carsten; Bayrasy, Pascal	Konferenzbeitrag Conference Paper
2016	Coupled simulations of electric arcs for switching devices with MpCCI and ANSYS Bayrasy, Pascal	Konferenzbeitrag Conference Paper
2016	Co-Simulationsmethoden für das thermische Management von Gesamtfahrzeugen bei Betrachtung dynamischer Fahrzyklen Brodbeck, Carsten; Bayrasy, Pascal	Konferenzbeitrag Conference Paper
2016	Applications of MpCCI-based fluid/structure interactions coupling to a vibrational and a rotational blades Yang, Yang; Liou, William W.; Bayrasy, Pascal	Konferenzbeitrag Conference Paper
2016	Survey of the cloud computing standards landscape 2015 Ziegler, Wolfgang; Becker, Bernd; Darmois, Emmanuel; Kingstedt, Anders; Grand, Olivier le; Schmitting, Peter	Konferenzbeitrag Conference Paper
2016	A sparse grid based method for generative dimensionality reduction of high-dimensional data Bohn, Bastian; Garcke, Jochen; Griebel, Michael	Zeitschriftenaufsatz Journal Article
2016	VarySched: A framework for variable scheduling in heterogeneous environments Süß, Tim; Döring, Nils; Gad, Ramy; Nagel, Lars; Brinkmann, Andre; Feld, Dustin; Soddemann, Thomas; Lankes, Stefan	Konferenzbeitrag Conference Paper
2016	Impact of the scheduling strategy in heterogeneous systems that provide co-scheduling Süß, Tim; Döring, Nils; Gad, Ramy; Nagel, Lars; Brinkmann, Andre; Feld, Dustin; Schricker, Eric; Soddemann, Thomas	Konferenzbeitrag Conference Paper
2016	Use of computational fluid dynamics for optimization of cell-based in vitro methods in inhalation research Brodbeck, C.; Wolf, K.; Ritter, D.; Knebel, J.	Zeitschriftenaufsatz Journal Article
2016	A full three dimensional numerical simulation of the sediment transport and the scouring at a rectangular obstacle Burkow, M.; Griebel, M.	Zeitschriftenaufsatz Journal Article
2016	MYNTS: Multi-phYsics NeTwork Simulator Clees, Tanja; Cassirer, Kläre; Hornung, Nils; Klaassen, Bernhard; Nikitin, Igor; Nikitina, Lialia; Suter, Robin; Torgovitskaia, Inna	Konferenzbeitrag Conference Paper
2016	Leveraging use of software-license-protected applications in Clouds Ziegler, Wolfgang; Rasheed, Hassan; Catewicz, Karl	Konferenzbeitrag Conference Paper
2016	Using co-simulation to reduce the calculation time in vehicle dynamics Kleinert, Jan; Wolf, Klaus; Christl, Johannes; Kunz, Stefan	Konferenzbeitrag Conference Paper
2016	Bringing systems simulations and 3D simulations together using FMI and MpCCI Kleinert, J.; Wolf, K.; Meyer, C.; Clauß, C.; Hoffmann, K.; Grätz, U.	Konferenzbeitrag Conference Paper
2016	A globally convergent method for generalized resistive systems and its application to stationary problems in gas transport networks Clees, T.; Hornung, N.; Nikitin, I.; Nikitina, L.	Konferenzbeitrag Conference Paper
2016	Parameter studies for energy networks with examples from gas transport Clees, T.	Konferenzbeitrag Conference Paper
2016	RBF-metamodel driven multi-objective optimization and its applications Clees, Tanja; Hornung, Nils; Nikitin, Igor; Nikitina, Lialia; Steffes-lai, Daniela	Zeitschriftenaufsatz Journal Article
2016	BioCreative V track 4: A shared task for the extraction of causal network information using the Biological Expression Language Rinaldi, Fabio; Ellendorff, Tilia Renate; Madan, Sumit; Clematide, Simon; Lek, Adrian van der; Mevissen, Theo; Fluck, Juliane	Zeitschriftenaufsatz Journal Article
2016	Closing the performance gap with modern C++ Heller, Thomas; Kaiser, Hartmut; Diehl, Patrick; Fey, Dietmar; Schweitzer, Marc Alexander	Konferenzbeitrag Conference Paper
2016	Bond-based peridynamics: A quantitative study of Mode I crack opening Diehl, Patrick; Franzelin, Fabian; Pflüger, Dirk; Ganzenmüller, Georg C.	Zeitschriftenaufsatz Journal Article
2016	Towards a pathway inventory of the human brain for modeling disease mechanisms underlying neurodegeneration Iyappan, A.; Gündel, M.; Shahid, M.; Wang, J.; Li, H.; Mevissen, H.-T.; Müller, B.; Fluck, J.; Jirsa, V.; Domide, L.; Younesi, E.; Hofmann-Apitius, M.	Zeitschriftenaufsatz Journal Article
2016	Hyperbolic cross approximation in infinite dimensions Dung, Dinh; Griebel, Michael	Zeitschriftenaufsatz Journal Article
2016	Optimized atomistic force fields for aqueous solutions of Magnesium and Calcium Chloride Elfgen, R.; Hülsmann, M.; Krämer, A.; Köddermann, T.; Kirschner, K.N.; Reith, D.	Zeitschriftenaufsatz Journal Article
2016	Comparison of acceleration techniques for selected low-level bioinformatics operations Langenkämper, D.; Jakobi, T.; Feld, D.; Jelonek, L.; Goesmann, A.; Nattkemper, T.W.	Zeitschriftenaufsatz Journal Article
2016	An efficient geosciences workflow on multi-core processors and GPUs: A case study for aerosol optical depth retrieval from MODIS satellite data Liu, Jia; Feld, Dustin; Xue, Yong; Garcke, Jochen; Soddemann, Thomas; Pan, Peiyuan	Zeitschriftenaufsatz Journal Article
2016	Computer simulations suggest direct and stable tip to tip interaction between the outer membrane channel TolC and the isolated docking domain of the multidrug RND efflux transporter AcrB Schmidt, Thomas H.; Raunest, Martin; Fischer, Nadine; Reith, Dirk; Kandt, Christian	Zeitschriftenaufsatz Journal Article
2016	Integration of UIMA text mining components into an event-based asynchronous microservice architecture Hodapp, Sven; Madan, Sumit; Fluck, Juliane; Zimmermann, Marc	Konferenzbeitrag Conference Paper
2016	Numerical optimisation of the pseudopotential-based lattice Boltzmann method Küllmer, K.; Krämer, A.; Reith, D.; Joppich, W.; Foysi, H.	Zeitschriftenaufsatz Journal Article
2016	Datenanalysemethoden zur Auswertung von Simulationsergebnissen im Crash und deren Abgleich mit dem Experiment Garcke, J.; Iza-Teran, R.; Prabakaran, Nikhil	Konferenzbeitrag Conference Paper
2016	Preface Garcke, J.; Pflüger, D.	Konferenzbeitrag Conference Paper
2016	On tensor product approximation of analytic functions Griebel, M.; Oettershagen, J.	Zeitschriftenaufsatz Journal Article
2016	Schwarz iterative methods: Infinite space splittings Griebel, M.; Oswald, P.	Zeitschriftenaufsatz Journal Article
2016	System-AMG approaches for industrial fully and adaptive implicit oil reservoir simulations Gries, Sebastian	Dissertation Doctoral Thesis
2016	Numerical aspects of model order reduction for gas transportation networks Grundel, Sara; Hornung, Nils; Roggendorf, Sarah	Konferenzbeitrag Conference Paper
2016	Optimizing molecular models through force-field parameterization via the efficient combination of modular program packages Hülsmann, Marco; Kirschner, Karl N.; Krämer, Andreas; Heinrich, Doron D.; Krämer-Fuhrmann, Ottmar; Reith, Dirk	Konferenzbeitrag Conference Paper
2016	NeuroRDF: Semantic integration of highly curated data to prioritize biomarker candidates in Alzheimer's disease Iyappan, A.; Kawalia, S.B.; Raschka, T.; Hofmann-Apitius, M.; Senger, P.	Zeitschriftenaufsatz Journal Article
2016	Reasoning over genetic variance information in cause-and-effect models of neurodegenerative diseases Naz, Mufassra; Kodamullil, Alpha Tom; Hofmann-Apitius, Martin	Zeitschriftenaufsatz Journal Article
2016	Optimizing molecular models through force-field parameterization Kirschner, K.; Hülsmann, M.; Krämer, A.; Krämer-Fuhrmann, O.; Reith, D.	Zeitschriftenaufsatz Journal Article
2016	Advancements in data management and data mining approaches Kalaitzopoulos, D.; Patel, K.; Younesi, E.	Aufsatz in Buch Book Article
2016	Rotationally symmetric tilings with convex pentagons and hexagons Klaassen, Bernhard	Zeitschriftenaufsatz Journal Article
2016	StarWatch 2.0: RFI filter for SETI signals Klimenko, S.; Nikitin, I.; Nikitina, L.; Konich, K.; Reinartz, K.; Tyul'Bashev, S.	Konferenzbeitrag Conference Paper
2016	Quasi-Newton methods for unstable partitioned fluid-structure interactions Koch, Marcel	Master Thesis
2016	Quasi-Newton methods for unstable partitioned fluid-structure interactions Koch, Marcel	Konferenzbeitrag Conference Paper
2016	Fluid-structure interaction simulation of racing car spoilers Landvogt, Bettina	Konferenzbeitrag Conference Paper
2016	Einsatz von Highspeed-Projektionsverfahren zur Bewegungs- und Deformationsanalyse von Sicherheitsversuchen Raguse, Karsten; Lutzke, Peter; Oeckerath, André	Konferenzbeitrag Conference Paper
2016	Decomposing and solving quasilinear second-order differential equations Schwarz, Fritz	Zeitschriftenaufsatz Journal Article
2016	Simulation of flow and electro-magnetic induced vibrations Wirth, Nadja	Konferenzbeitrag Conference Paper
2016	Sparse Grids and Applications - Stuttgart 2014	Tagungsband Conference Proceeding

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