Below are the SQLDump files, along with the table names:
NeuroTransDB as Excel
Here are the tables for Human, Mouse and Rat as Excel/CSV files:
NeuroTransDB Normalized Human Data
Below is the SQLDump file and Excel sheet data for Human Normalized meta-data for AD1 studies:
META-DATA CURATION GUIDELINES WITH ILLUSTRATIONS
To download the guidelines for meta-data curation, please click here. This file contains information for each curated field and how the curation was carried out.
LIST OF EXPERIMENTS RETRIEVED FROM PUBLIC REPOSITORIES FOR ALZHEIMER'S DISEASE:
To download the list of experiments, that were retrieved using automated method (please refer to Data Retrieval Section in the publication), which were further prioritized and curated, click here.
PRIORITY 1 EXPERIMENT IDS:
To download a list of Priority 1 experiment IDs for which NeuroTransDB provides manually curated meta-data information, please click here to download.
MYSQL INSTALLTION AND DATA UPLOAD
Please refer to the below link to install MySQL
Below, we describe simple steps for loading the provided SQLDumps into your installed MySQL.
Step 1: Start mysql with a username (e.g. myname) and password (if given)
mysql -u myname -p
For more details please see: https://dev.mysql.com/doc/refman/5.0/en/connecting-disconnecting.html
Step 2: Create a new empty database of your choice (e.g. test), and then exit MYSQL
CREATE DATABASE test;
Step 3: Import the given SQLDump table into this created database
mysql -u myname -p test <human_AD1.sql
Please refer to the below link on how to use MySQL database: