Team

Scientists

 

Prof. Dr. Holger Fröhlich

 

Research interests: machine learning & statistical data mining with application to precision medicine, systems medicine and drug discovery.

 


All publications

 

Mohamed Aborageh

 

I joined Fraunhofer SCAI in October 2019 as a master’s student and I am currently doing my PhD. My current area of research is the use of machine learning methods for predicting disease progression in neurodegenerative diseases.
 

Projects: Real4Reg

 

Tim Adams

 

I’m a Computer Scientist that joined SCAI in late 2017. My main research focus is the development of applications for exploration, evaluation and visualization of data in the biomedical domain.


Projects:
CePPH
 

All publications

 

Jonas Botz

 

I'm a physicist and joined Fraunhofer in 2022 as a PhD student. My current research interest lies in combining dynamic and mechanistic models (e.g. ODEs) with methods from machine learning to predict, analyze and model pandemics such as COVID-19.
 

Projects: AIOLOS
 

All publications

 

Jannis Guski

 

With a background in computer science, I am now doing my PhD exploring applications of machine learning in the biomedical domain. My current project is the development of a model to recommend options of non-pharmaceutical intervention in pandemic situations.
 

Projects: AIOLOS

 

Dr. Tom Hähnel

 

I am a physician who joined Fraunhofer SCAI in early 2023. My main focus is clinical research in Parkinson's disease using machine learning and statistical methods. My current project is about identification and prediction of different progression types in Parkinson's disease.


Projects:
ParKInsonPredict

 

Kiril Klein

 

I am a visiting PhD student affiliated with the University of Copenhagen. The focus of my research is representation learning on EHRs and subsequent analysis. Currently, my research focuses on causal inference for identifying adverse drug reactions.

 

Sophia Krix

 

Coming from neurobiology, I am now using data science and machine learning to tackle biomedical problems. My current project involves drug repositioning using deep learning methods.


Projects:
ADIS
 

All publications

 

Manuel Lentzen

 

I am a quantitative biologist and joined Fraunhofer SCAI in 2020 as a PhD. student. My research focuses on the generation and application of pre-trained language models for German text data from the clinical domain.

Projects: Real4Reg


All publications

 

Sumit Madan

 

I'm a senior data scientist/project manager, passionate about pursuing healthcare and life science scientific challenges that improve the understanding of human biology and diseases. My research focuses on developing AI methods to extract relevant biomedical interactions/relationships from unstructured data (e.g., scientific literature, clinical notes, and protein sequences).

Projects: Graph Machine Learning, AIOLOS, IDERHA

All publications

 

Dr. Sobhan Moazemi

 

With a background in data science and medical AI, I joined Fraunhofer SCAI as a Senior Postdoc Biomedical Data Scientist in October 2023. My research mainly contributed to the applications of AI and ML in personalized medicine. In my current role, I am responsible for project management and conducting applied research in generative AI and synthetic health data.

Projects: IDERHA, NFDI4Health

 

Sabyasachi Patajoshi

 

I am a computer scientist by formal training; broadly, my interests lie in recognizing and deciphering patterns in the sequence and structure of proteins, small molecules and interactions between them. My research at SCAI focuses on the development of deep learning methods for solving problems in the area of targeted protein degradation.

 

Tamara Raschka

 

I am an applied mathematician working in Fraunhofer since 2015, currently doing my PhD. My research focuses mainly on the application of machine learning algorithms to gene expression data and its possibilities for precision medicine.


Projects:
Zentrum für Maschinelles Lernen, DIGIPD


All publications

 

Sebastian Schwick

 

I am a mathematician and joined Fraunhofer SCAI in 2024 as a PhD student. My research focuses on developing generative AI models for the personalized prediction and simulation of patient trajectories as part of a digital twin.
 

Projects: CERTAINTY

 

Diego Valderrama

 

I am a biomedical engineer and joined Fraunhofer SCAI in June 2022 as a PhD student. My current research focuses on hybrid AI models to combine machine learning and pharmacological models to predict and analyze the effect of biomedical variables on patients' behavior for clinical studies.


Projects:
Scientific Machine Learning
 

All publications

 

Bachelor & Master Students

 

Lennart Carsten-Behrens

 

Johanna Driever


I joined Fraunhofer SCAI in October 2022 for my computer science bachelor thesis, here I fine-tuned a BERT model using structured EHR data to predict Parkinson's disease. After completing my bachelor thesis, I continued working on the project. Currently, I’m pursuing a Master's degree in Computer Science at the University of Bonn.

 

Thomas Gerlach

 

Neha Nageswaran


I am an AI enthusiast and master's student in AI & Robotics from Hof University. I am working at Fraunhofer SCAI for my master's thesis. I am looking into the development of a digitalized version of UPDRS motor score using different neural network architectures.

 

Steffen Thiel

 

Georg von Arnim

 

I am a Bioinformatics student from FU Berlin and joined Fraunhofer SCAI in October 2023 to write my Master’s thesis. My research topic is personalized drug recommendation using pre-trained GNNs on a large biomedical knowledge graph.